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Resource Logistics Inc.
Posted 54 days agoVerified live 1d ago
Bioinformatics Engineer
Brief overview
Remote
Sequencing Data AnalysisVariant Data AnalysisDragenBWAVEPNextflowAWSTerraformPythonDockerRESTful APIsGit
About the company
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Resource Logistics Inc.resource-logistics.com
Resource Logistics is an information technology company providing ERP, CRM implementation, software solutions, and staffing services.
Job description
Summary
Resource Logistics Inc. is recruiting a Bioinformatics Engineer for a remote role based in Secaucus, New Jersey. The role focuses on sequencing data analysis, variant analysis, bioinformatics pipeline development, cloud infrastructure, programming, APIs, containerization, reporting, visualization, and CI/CD, with clinical diagnostics experience considered a plus.
Skills
- Bioinformatics tools such as Dragen, bwa, VEP, FastQC, MultiQC, samtools, bedtools
- Experience with sequencing data analysis, bioinformatics, variant data analysis
- Pipeline workflow management languages: Cromwell, CWL, etc
- Cloud Computing: AWS
- Infrastructure management: Terraform, AWS CDK
- Programming Languages: Advanced level with interpreted/scripting languages such as Python, JavaScript/typescript, R, etc
- Containerizing: Docker
- Experience with designing and working with application programming interfaces (e.g. JSON based RESTful APIs)
- Web Frameworks: Python Flask, React Native, Bootstrap
- Reporting: Familiarity with R Markdown, Jupyter Notebook
- Visualization: Experience with any ggplot2/tidyverse, Plotly, matplot lib, Tableau, d3.js
- Source Control: Git
- CI/CD: GitHub CI/CD
- Familiarity with AI developer tools like GitHub Copilot
- Understanding of environment management
- Nextflow
- Experience of working in clinical diagnostics setting (regulations, controlled processes, environment management)
Qualifications
Must Haves
- Bioinformatics tools such as Dragen, bwa, VEP, FastQC, MultiQC, samtools, bedtools
- Experience with sequencing data analysis, bioinformatics, variant data analysis
- Pipeline workflow management languages: Cromwell, CWL, etc
- Cloud Computing: AWS
- Infrastructure management: Terraform, AWS CDK
- Programming Languages: Advanced level with interpreted/scripting languages such as Python, JavaScript/typescript, R, etc
- Containerizing: Docker
- Experience with designing and working with application programming interfaces (e.g. JSON based RESTful APIs)
- Web Frameworks: Python Flask, React Native, Bootstrap
- Reporting: Familiarity with R Markdown, Jupyter Notebook
- Visualization: Experience with any ggplot2/tidyverse, Plotly, matplot lib, Tableau, d3.js
- Source Control: Git
- CI/CD: GitHub CI/CD
- Familiarity with AI developer tools like GitHub Copilot
- Understanding of environment management
Nice to Haves
- Nextflow
- Experience of working in clinical diagnostics setting (regulations, controlled processes, environment management)
Benefits
- Remote work arrangement in Secaucus, NJ
